PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA11g13550
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 173aa    MW: 19737.7 Da    PI: 9.4419
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA11g13550genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.10.000594971123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C+ C+k+F++   L  H  +H
  CA11g13550 49 FECKTCNKHFPSFQALGGHRASH 71
                89**********99999998887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139122.5E-114973IPR007087Zinc finger, C2H2
SuperFamilySSF576671.19E-649114No hitNo description
SMARTSM003550.154971IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.5154976IPR007087Zinc finger, C2H2
PROSITE patternPS0002805171IPR007087Zinc finger, C2H2
PROSITE profilePS501578.95492119IPR007087Zinc finger, C2H2
PfamPF139128.7E-892117IPR007087Zinc finger, C2H2
SMARTSM00355192114IPR015880Zinc finger, C2H2-like
PROSITE patternPS00028094114IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MTTLKRSREN DMQIEAEAMA NCALMLLSRL NNHNDNNSSS SSDHHINDFE CKTCNKHFPS  60
FQALGGHRAS HNKRPRLFGE YLVQTKKNNK IHKCSICCME FSLGQALGGH MRRHRDEISK  120
TLMAKIPVLK KSNSSKRIFC LDLNLTPNDY HVDDLKLWPA TLISSPVFRC FF*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016557480.11e-127PREDICTED: zinc finger protein ZAT11-like
SwissprotQ9SLD49e-36ZAT11_ARATH; Zinc finger protein ZAT11
TrEMBLM1B9I94e-88M1B9I9_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000402061e-87(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36624150
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.15e-35C2H2 family protein